42985

Getting error when trying to download pdf table from imported csv file in shiny app

Hi I have a simple shiny app from which i wish to download a pdf table after importing a csv file into it. I suspect that i use the parameters incorrectly as i take :

Error : 'file' must be a character string or connection

#ui.r library(shiny) library(rmarkdown) fluidPage(sidebarLayout( sidebarPanel( fileInput("file1", "Input CSV-File"), downloadButton( outputId = "downloader", label = "Download PDF" ) ), mainPanel(tableOutput("table")) )) #server.r function(input, output) { thedata <- reactive({ inFile <- req(input$file1) read.csv(inFile$datapath) }) output$table <- renderTable({ thedata() }) output$downloader <- downloadHandler( filename = "Student-report.pdf", content = function(file){ out = rmarkdown::render("kable.Rmd") file.rename(out, file) } ) } #kable.rmd --- output: pdf_document params: table: 'NULL' file: 'NULL' --- ```{r echo = FALSE, message = FALSE, include = FALSE} library(knitr) ``` ```{r nice-tab, tidy = FALSE, echo = FALSE, message = FALSE} read.csv(file = params$file1) ``` ```{r} params[["table"]] ```

Answer1:

The issue was with using file in your Rmd file. And because you've got the dataframe in a reactive function, you don't have to pass the file separately. Please see the updated code:

#ui.r library(shiny) library(rmarkdown) ui <- fluidPage(sidebarLayout( sidebarPanel( fileInput("file1", "Input CSV-File"), downloadButton( outputId = "downloader", label = "Download PDF" ) ), mainPanel(tableOutput("table")) )) #server.r server <- function(input, output) { thedata <- reactive({ inFile <- req(input$file1) read.csv(inFile$datapath) }) output$table <- renderTable({ thedata() }) output$downloader <- downloadHandler( filename = "Student-report.pdf", content = function(file){ out <- rmarkdown::render("kable.Rmd", pdf_document()) file.rename(out, file) } ) } shinyApp(ui,server)

Kable.Rmd

--- output: pdf_document --- ```{r echo = FALSE, message = FALSE, include = FALSE} library(knitr) ``` ```{r} kable(thedata()) ```

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